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Dynamic generation of statistical reports using literate data analysis. LATEX: a document preparation system: user’s guide and reference manual. Statistical analyses and reproducible research. In: Proceedeings of the 2008 Pharmaceutical Users Software Exchange (PhUSE) Conference, vol. 1894, 2014 1402ĭauchy, A., Guennec, S.L.: Professional outputs with ODS LATEX. R markdown: integrating a reproducible analysis tool into introductory statistics. PharmTeX makes available to report authors the strengths of LaTeX document processing without the need for extensive training.īaumer B, Cetinkaya-Rundel M, Bray A, Loi L, Horton NJ. QC is made much simpler, since there is a direct link between analysis output and report input. PharmTeX significantly reduces the time required for creating a scientific report fully compliant with regulatory and industry expectations. No previous experience and only a few hours of training are required to start writing reports using PharmTeX. Code listings can be included directly from source. The PharmTeX templates allow for inclusion of tables directly from mathematical software output as well and figures from several formats.

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A software collection was compiled for users not wanting to manually install the required software components. Using this setup makes LaTeX much more accessible for users with no prior LaTeX experience. The PharmTeX creators put a substantial effort into simplifying the sometimes complex elements of LaTeX into user-friendly functions that rely on advanced LaTeX and Perl code running in the background. In the present article, we present the LaTeX-based open-source reporting platform, PharmTeX, a community-based effort to make reporting simple, reproducible, and user-friendly.

Given the large number of figures, tables, references, and other elements, this is often a tedious task involving hours of copying and pasting and substantial efforts in quality control (QC). Many of these reports are created using text processing tools such as Microsoft Word. Every year, the pharmaceutical industry generates a large number of scientific reports related to drug research, development, and regulatory submissions.

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